Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A2P16615 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A2P16615 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A2P16615 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 AL805961.1-203ENST00000641078 1258 ntBASIC16.53■□□□□ 0.24
ATP2A2P16615 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A2P16615 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A2P16615 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A2P16615 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A2P16615 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A2P16615 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A2P16615 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ATP2A2P16615 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 RNMTL1P1-201ENST00000454103 560 ntBASIC16.52■□□□□ 0.24
ATP2A2P16615 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 AC004066.1-201ENST00000502488 802 ntBASIC16.52■□□□□ 0.24
ATP2A2P16615 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A2P16615 AP003171.2-201ENST00000528208 925 ntBASIC16.52■□□□□ 0.24
ATP2A2P16615 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A2P16615 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A2P16615 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 AF254983.2-201ENST00000612331 135 ntBASIC16.52■□□□□ 0.24
ATP2A2P16615 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATP2A2P16615 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A2P16615 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A2P16615 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.52■□□□□ 0.23
ATP2A2P16615 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A2P16615 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.52■□□□□ 0.23
ATP2A2P16615 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A2P16615 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A2P16615 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A2P16615 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A2P16615 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 SNX18-202ENST00000343017 3140 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 AL355334.1-201ENST00000417713 215 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A2P16615 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A2P16615 RN7SL163P-201ENST00000583100 276 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 BNIP3P13-201ENST00000599968 566 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.51■□□□□ 0.23
ATP2A2P16615 AC004923.1-202ENST00000642106 209 ntBASIC16.51■□□□□ 0.23
ATP2A2P16615 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A2P16615 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A2P16615 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms