Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1DP16402 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.69□□□□□ -0.38
HIST1H1DP16402 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1DP16402 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1DP16402 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1DP16402 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H1DP16402 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 MYADML-201ENST00000474610 2147 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 AL139400.1-201ENST00000366220 510 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 CNN2P2-201ENST00000443536 909 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 CNN2P3-201ENST00000450201 906 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 MEIS3P1-201ENST00000495167 958 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 AC092364.2-202ENST00000597012 1073 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 AL844908.2-201ENST00000609461 460 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 AL391069.4-201ENST00000609583 481 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 AL136317.3-201ENST00000618497 906 ntBASIC12.68□□□□□ -0.38
HIST1H1DP16402 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1DP16402 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HIST1H1DP16402 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 AC011840.2-201ENST00000563063 1520 ntBASIC12.67□□□□□ -0.38
HIST1H1DP16402 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1DP16402 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H1DP16402 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms