Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LAMP1P11279 ACKR1-201ENST00000368121 1240 ntBASIC14.15□□□□□ -0.14
LAMP1P11279 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 ACTBP8-201ENST00000403258 1108 ntBASIC14.15□□□□□ -0.14
LAMP1P11279 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.15□□□□□ -0.14
LAMP1P11279 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.15□□□□□ -0.14
LAMP1P11279 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LAMP1P11279 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.15□□□□□ -0.14
LAMP1P11279 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 AC027796.2-201ENST00000575326 344 ntBASIC14.15□□□□□ -0.14
LAMP1P11279 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.15□□□□□ -0.14
LAMP1P11279 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.15□□□□□ -0.14
LAMP1P11279 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 AC067750.1-201ENST00000608826 6545 ntBASIC14.15□□□□□ -0.14
LAMP1P11279 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMP1P11279 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 AC012617.1-204ENST00000586340 2305 ntBASIC14.15□□□□□ -0.14
LAMP1P11279 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMP1P11279 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMP1P11279 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LAMP1P11279 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LAMP1P11279 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMP1P11279 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMP1P11279 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.15□□□□□ -0.15
LAMP1P11279 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LAMP1P11279 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMP1P11279 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.14□□□□□ -0.15
LAMP1P11279 TLE1P1-201ENST00000422965 589 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.14□□□□□ -0.15
LAMP1P11279 FO681548.1-201ENST00000455617 1132 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 AC093433.1-201ENST00000458048 571 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMP1P11279 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMP1P11279 AP001063.1-201ENST00000568332 529 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.14□□□□□ -0.15
LAMP1P11279 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 LINC02560-201ENST00000596379 459 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 AC092364.2-202ENST00000597012 1073 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMP1P11279 AC008494.3-201ENST00000606615 944 ntBASIC14.14□□□□□ -0.15
LAMP1P11279 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
LAMP1P11279 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMP1P11279 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMP1P11279 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LAMP1P11279 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LAMP1P11279 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 AL136172.1-201ENST00000598590 1394 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms