Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CCDC188H7C350 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC188H7C350 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 AC090643.2-201ENST00000623442 2029 ntBASIC15.52■□□□□ 0.08
CCDC188H7C350 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC188H7C350 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC188H7C350 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC188H7C350 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC188H7C350 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC188H7C350 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC188H7C350 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC188H7C350 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC188H7C350 AL603764.1-201ENST00000636452 321 ntBASIC15.52■□□□□ 0.08
CCDC188H7C350 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CCDC188H7C350 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 AC073548.1-201ENST00000624088 1882 ntBASIC15.52■□□□□ 0.07
CCDC188H7C350 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC188H7C350 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC188H7C350 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC188H7C350 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC188H7C350 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC188H7C350 SALL4P5-201ENST00000419001 1760 ntBASIC15.52■□□□□ 0.07
CCDC188H7C350 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC188H7C350 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC188H7C350 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC188H7C350 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 AL139094.1-201ENST00000405549 1188 ntBASIC15.51■□□□□ 0.07
CCDC188H7C350 AC007969.1-201ENST00000433675 447 ntBASIC15.51■□□□□ 0.07
CCDC188H7C350 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC188H7C350 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC188H7C350 MIR3687-2-201ENST00000577708 61 ntBASIC15.51■□□□□ 0.07
CCDC188H7C350 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 AC093813.1-201ENST00000605066 256 ntBASIC15.51■□□□□ 0.07
CCDC188H7C350 MIR3687-1-201ENST00000614492 61 ntBASIC15.51■□□□□ 0.07
CCDC188H7C350 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC188H7C350 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC188H7C350 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC188H7C350 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC188H7C350 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 AL136172.1-201ENST00000598590 1394 ntBASIC15.5■□□□□ 0.07
CCDC188H7C350 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC188H7C350 AC107918.4-201ENST00000641966 3141 ntBASIC15.5■□□□□ 0.07
CCDC188H7C350 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC188H7C350 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms