Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 OR2I1P-208ENST00000641137 4948 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 LINC00552-201ENST00000625151 2579 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 LRRC59-203ENST00000576448 1531 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AC139749.1-202ENST00000617529 3139 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 PIN1P1-201ENST00000412108 996 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 GOLGA6L11P-201ENST00000417252 1298 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AC002472.2-201ENST00000442739 958 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 TERF1P3-201ENST00000505638 1227 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 RN7SL204P-201ENST00000582831 262 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AL355385.1-201ENST00000606123 409 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 AC008494.3-201ENST00000606615 944 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 KRT8P22-201ENST00000562317 1415 ntBASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV1A0A0A0MS02 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.9□□□□□ -0.67
TRGV1A0A0A0MS02 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 MTHFR-210ENST00000641407 2387 ntBASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRGV1A0A0A0MS02 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms