Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC005703.6-201ENST00000623265 1329 ntBASIC24.44■■□□□ 1.5
SNX25Q9H3E2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 AL356740.2-201ENST00000601559 647 ntBASIC24.44■■□□□ 1.5
SNX25Q9H3E2 AL117332.1-201ENST00000622628 974 ntBASIC24.44■■□□□ 1.5
SNX25Q9H3E2 AL139125.2-201ENST00000623134 1869 ntBASIC24.44■■□□□ 1.5
SNX25Q9H3E2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNX25Q9H3E2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 LINC01124-201ENST00000409786 2117 ntBASIC24.43■■□□□ 1.5
SNX25Q9H3E2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNX25Q9H3E2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
SNX25Q9H3E2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX25Q9H3E2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNX25Q9H3E2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX25Q9H3E2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX25Q9H3E2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNX25Q9H3E2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SNX25Q9H3E2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
SNX25Q9H3E2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SNX25Q9H3E2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNX25Q9H3E2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 MIR3621-201ENST00000580529 85 ntBASIC24.4■■□□□ 1.5
SNX25Q9H3E2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 AC141586.4-201ENST00000624558 1573 ntBASIC24.4■■□□□ 1.5
SNX25Q9H3E2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.4■■□□□ 1.5
SNX25Q9H3E2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SNX25Q9H3E2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SNX25Q9H3E2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SNX25Q9H3E2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 LINC00543-201ENST00000567234 1845 ntBASIC24.37■■□□□ 1.49
SNX25Q9H3E2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX25Q9H3E2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNX25Q9H3E2 ALDH1A3-203ENST00000557963 1670 ntBASIC24.36■■□□□ 1.49
SNX25Q9H3E2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNX25Q9H3E2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNX25Q9H3E2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNX25Q9H3E2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNX25Q9H3E2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.35■■□□□ 1.49
SNX25Q9H3E2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
SNX25Q9H3E2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms