Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN3Q9H347 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 UNC93B8-201ENST00000511903 705 ntBASIC21.16■□□□□ 0.98
UBQLN3Q9H347 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
UBQLN3Q9H347 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN3Q9H347 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBQLN3Q9H347 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBQLN3Q9H347 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN3Q9H347 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
UBQLN3Q9H347 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN3Q9H347 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN3Q9H347 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 HLA-L-211ENST00000482052 1765 ntBASIC21.12■□□□□ 0.97
UBQLN3Q9H347 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.12■□□□□ 0.97
UBQLN3Q9H347 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
UBQLN3Q9H347 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 ABCB10P4-201ENST00000566803 2184 ntBASIC21.1■□□□□ 0.97
UBQLN3Q9H347 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN3Q9H347 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 AC133561.1-201ENST00000568600 2415 ntBASIC21.09■□□□□ 0.97
UBQLN3Q9H347 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 TSPY9P-201ENST00000440215 945 ntBASIC21.09■□□□□ 0.97
UBQLN3Q9H347 TSPY11P-201ENST00000442607 1045 ntBASIC21.09■□□□□ 0.97
UBQLN3Q9H347 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.09■□□□□ 0.97
UBQLN3Q9H347 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN3Q9H347 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 KRT16P3-201ENST00000439127 1283 ntBASIC21.08■□□□□ 0.97
UBQLN3Q9H347 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms