Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A7Q99884 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A7Q99884 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.81■□□□□ 0.76
SLC6A7Q99884 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A7Q99884 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A7Q99884 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A7Q99884 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A7Q99884 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC6A7Q99884 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
SLC6A7Q99884 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A7Q99884 CLDN5-201ENST00000403084 2357 ntBASIC19.8■□□□□ 0.76
SLC6A7Q99884 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A7Q99884 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A7Q99884 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A7Q99884 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A7Q99884 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A7Q99884 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.79■□□□□ 0.76
SLC6A7Q99884 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A7Q99884 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A7Q99884 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A7Q99884 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A7Q99884 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A7Q99884 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A7Q99884 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A7Q99884 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A7Q99884 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLC6A7Q99884 PKD1P6-201ENST00000343738 4769 ntBASIC19.78■□□□□ 0.76
SLC6A7Q99884 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 MIR4508-201ENST00000584178 70 ntBASIC19.78■□□□□ 0.76
SLC6A7Q99884 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC6A7Q99884 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A7Q99884 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.77■□□□□ 0.76
SLC6A7Q99884 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC6A7Q99884 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A7Q99884 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SLC6A7Q99884 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
SLC6A7Q99884 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.77■□□□□ 0.75
SLC6A7Q99884 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SLC6A7Q99884 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A7Q99884 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A7Q99884 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SLC6A7Q99884 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A7Q99884 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A7Q99884 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A7Q99884 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A7Q99884 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A7Q99884 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A7Q99884 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 AL031848.2-201ENST00000607670 837 ntBASIC19.75■□□□□ 0.75
SLC6A7Q99884 AC131212.1-201ENST00000613771 668 ntBASIC19.75■□□□□ 0.75
SLC6A7Q99884 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A7Q99884 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A7Q99884 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A7Q99884 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SLC6A7Q99884 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 AC103724.3-201ENST00000564481 992 ntBASIC19.74■□□□□ 0.75
SLC6A7Q99884 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A7Q99884 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A7Q99884 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A7Q99884 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms