Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH12P55289 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.24■□□□□ 0.99
CDH12P55289 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CDH12P55289 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH12P55289 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH12P55289 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH12P55289 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CDH12P55289 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH12P55289 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH12P55289 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDH12P55289 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 KRT18P60-201ENST00000312876 1297 ntBASIC21.23■□□□□ 0.99
CDH12P55289 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH12P55289 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH12P55289 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH12P55289 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CDH12P55289 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDH12P55289 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH12P55289 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH12P55289 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH12P55289 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDH12P55289 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH12P55289 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDH12P55289 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH12P55289 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH12P55289 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.2■□□□□ 0.99
CDH12P55289 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDH12P55289 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH12P55289 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH12P55289 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDH12P55289 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH12P55289 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH12P55289 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH12P55289 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 AL592295.1-201ENST00000400984 884 ntBASIC21.19■□□□□ 0.98
CDH12P55289 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH12P55289 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDH12P55289 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH12P55289 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 AC090877.2-201ENST00000558441 1738 ntBASIC21.18■□□□□ 0.98
CDH12P55289 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDH12P55289 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH12P55289 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH12P55289 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH12P55289 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDH12P55289 LONRF2P2-201ENST00000439212 571 ntBASIC21.17■□□□□ 0.98
CDH12P55289 ABHD17AP5-201ENST00000580133 923 ntBASIC21.17■□□□□ 0.98
CDH12P55289 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH12P55289 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH12P55289 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH12P55289 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH12P55289 ANOS2P-203ENST00000472227 1816 ntBASIC21.17■□□□□ 0.98
CDH12P55289 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH12P55289 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CDH12P55289 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH12P55289 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CDH12P55289 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH12P55289 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH12P55289 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH12P55289 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH12P55289 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH12P55289 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CDH12P55289 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH12P55289 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH12P55289 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH12P55289 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH12P55289 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH12P55289 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDH12P55289 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms