Protein–RNA interactions for Protein: P23258

TUBG1, Tubulin gamma-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1P23258 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TUBG1P23258 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBG1P23258 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBG1P23258 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBG1P23258 AL035685.1-201ENST00000636663 812 ntBASIC19.78■□□□□ 0.76
TUBG1P23258 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TUBG1P23258 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TUBG1P23258 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TUBG1P23258 LINC01124-201ENST00000409786 2117 ntBASIC19.78■□□□□ 0.76
TUBG1P23258 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBG1P23258 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBG1P23258 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBG1P23258 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TUBG1P23258 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBG1P23258 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBG1P23258 AC239859.2-201ENST00000444165 318 ntBASIC19.77■□□□□ 0.76
TUBG1P23258 MIR4787-201ENST00000607364 84 ntBASIC19.77■□□□□ 0.76
TUBG1P23258 AC092028.1-203ENST00000608262 953 ntBASIC19.77■□□□□ 0.76
TUBG1P23258 MIR6722-201ENST00000617286 78 ntBASIC19.77■□□□□ 0.76
TUBG1P23258 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBG1P23258 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBG1P23258 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBG1P23258 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TUBG1P23258 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TUBG1P23258 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TUBG1P23258 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBG1P23258 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBG1P23258 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBG1P23258 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBG1P23258 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBG1P23258 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBG1P23258 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBG1P23258 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TUBG1P23258 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBG1P23258 SNX5-217ENST00000606557 1087 ntBASIC19.75■□□□□ 0.75
TUBG1P23258 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.75■□□□□ 0.75
TUBG1P23258 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBG1P23258 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBG1P23258 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TUBG1P23258 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBG1P23258 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TUBG1P23258 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TUBG1P23258 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TUBG1P23258 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBG1P23258 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBG1P23258 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBG1P23258 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBG1P23258 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBG1P23258 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.73■□□□□ 0.75
TUBG1P23258 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBG1P23258 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
TUBG1P23258 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBG1P23258 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBG1P23258 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBG1P23258 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBG1P23258 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBG1P23258 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.72■□□□□ 0.75
TUBG1P23258 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBG1P23258 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.72■□□□□ 0.75
TUBG1P23258 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.72■□□□□ 0.75
TUBG1P23258 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBG1P23258 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBG1P23258 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.71■□□□□ 0.75
TUBG1P23258 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBG1P23258 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TUBG1P23258 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.71■□□□□ 0.75
TUBG1P23258 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TUBG1P23258 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.71■□□□□ 0.75
TUBG1P23258 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms