Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSSCA1O60232 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSSCA1O60232 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSSCA1O60232 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSSCA1O60232 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SSSCA1O60232 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSSCA1O60232 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SSSCA1O60232 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSSCA1O60232 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSSCA1O60232 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.6■□□□□ 0.57
SSSCA1O60232 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSSCA1O60232 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSSCA1O60232 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SSSCA1O60232 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.59■□□□□ 0.57
SSSCA1O60232 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
SSSCA1O60232 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.59■□□□□ 0.57
SSSCA1O60232 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SSSCA1O60232 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.59■□□□□ 0.57
SSSCA1O60232 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SSSCA1O60232 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSSCA1O60232 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
SSSCA1O60232 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SSSCA1O60232 DUSP8P3-201ENST00000399571 1760 ntBASIC18.58■□□□□ 0.57
SSSCA1O60232 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SSSCA1O60232 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SSSCA1O60232 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.58■□□□□ 0.56
SSSCA1O60232 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.58■□□□□ 0.56
SSSCA1O60232 CR559946.2-201ENST00000623684 991 ntBASIC18.58■□□□□ 0.56
SSSCA1O60232 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SSSCA1O60232 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.58■□□□□ 0.56
SSSCA1O60232 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.58■□□□□ 0.56
SSSCA1O60232 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSSCA1O60232 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SSSCA1O60232 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.57■□□□□ 0.56
SSSCA1O60232 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.57■□□□□ 0.56
SSSCA1O60232 GUSBP5-202ENST00000510805 1989 ntBASIC18.57■□□□□ 0.56
SSSCA1O60232 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSSCA1O60232 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SSSCA1O60232 LINC00526-201ENST00000581067 1875 ntBASIC18.56■□□□□ 0.56
SSSCA1O60232 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.56■□□□□ 0.56
SSSCA1O60232 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 AC092068.2-201ENST00000590491 1708 ntBASIC18.56■□□□□ 0.56
SSSCA1O60232 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 SMPD5-203ENST00000639008 1464 ntBASIC18.56■□□□□ 0.56
SSSCA1O60232 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSSCA1O60232 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSSCA1O60232 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SSSCA1O60232 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SSSCA1O60232 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSSCA1O60232 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SSSCA1O60232 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.54■□□□□ 0.56
SSSCA1O60232 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSSCA1O60232 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.53■□□□□ 0.56
SSSCA1O60232 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.53■□□□□ 0.56
SSSCA1O60232 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
SSSCA1O60232 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SSSCA1O60232 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.53■□□□□ 0.56
SSSCA1O60232 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms