Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GSC2O15499 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
GSC2O15499 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GSC2O15499 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GSC2O15499 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GSC2O15499 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.05■■□□□ 1.12
GSC2O15499 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
GSC2O15499 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GSC2O15499 SLC25A24-204ENST00000569674 2357 ntBASIC22.04■■□□□ 1.12
GSC2O15499 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.04■■□□□ 1.12
GSC2O15499 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GSC2O15499 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GSC2O15499 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
GSC2O15499 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.04■■□□□ 1.12
GSC2O15499 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GSC2O15499 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.03■■□□□ 1.12
GSC2O15499 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.03■■□□□ 1.12
GSC2O15499 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.03■■□□□ 1.12
GSC2O15499 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GSC2O15499 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.02■■□□□ 1.12
GSC2O15499 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GSC2O15499 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.12
GSC2O15499 AC242852.2-201ENST00000615738 1807 ntBASIC22.02■■□□□ 1.12
GSC2O15499 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GSC2O15499 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
GSC2O15499 DUX4L29-201ENST00000425409 679 ntBASIC22.02■■□□□ 1.12
GSC2O15499 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GSC2O15499 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.01■■□□□ 1.11
GSC2O15499 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
GSC2O15499 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GSC2O15499 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.01■■□□□ 1.11
GSC2O15499 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
GSC2O15499 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22■■□□□ 1.11
GSC2O15499 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22■■□□□ 1.11
GSC2O15499 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 HLA-V-202ENST00000446817 847 ntBASIC22■■□□□ 1.11
GSC2O15499 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22■■□□□ 1.11
GSC2O15499 AC044849.2-201ENST00000606596 710 ntBASIC22■■□□□ 1.11
GSC2O15499 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22■■□□□ 1.11
GSC2O15499 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22■■□□□ 1.11
GSC2O15499 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
GSC2O15499 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.99■■□□□ 1.11
GSC2O15499 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.99■■□□□ 1.11
GSC2O15499 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GSC2O15499 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
GSC2O15499 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GSC2O15499 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GSC2O15499 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
GSC2O15499 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.97■■□□□ 1.11
GSC2O15499 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L13-201ENST00000554103 1267 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L15-201ENST00000611059 1267 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L23-201ENST00000615195 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L24-201ENST00000617576 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L22-201ENST00000618238 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L20-201ENST00000619712 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L21-201ENST00000622058 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L10-201ENST00000622460 1267 ntBASIC21.97■■□□□ 1.11
GSC2O15499 DUX4L25-201ENST00000624915 1269 ntBASIC21.97■■□□□ 1.11
GSC2O15499 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.97■■□□□ 1.11
GSC2O15499 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GSC2O15499 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.97■■□□□ 1.11
GSC2O15499 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GSC2O15499 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GSC2O15499 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
GSC2O15499 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
GSC2O15499 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GSC2O15499 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GSC2O15499 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.95■■□□□ 1.1
GSC2O15499 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
GSC2O15499 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.95■■□□□ 1.1
GSC2O15499 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms