Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM27A0A1W2PRY6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 MIR3665-201ENST00000578708 105 ntBASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM27A0A1W2PRY6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM27A0A1W2PRY6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM27A0A1W2PRY6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM27A0A1W2PRY6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.08■□□□□ 0.33
SMIM27A0A1W2PRY6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SMIM27A0A1W2PRY6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SMIM27A0A1W2PRY6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 ESRRAP2-201ENST00000418437 1549 ntBASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMIM27A0A1W2PRY6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMIM27A0A1W2PRY6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.06■□□□□ 0.32
SMIM27A0A1W2PRY6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM27A0A1W2PRY6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM27A0A1W2PRY6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms