Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 TSPY13P-201ENST00000338964 914 ntBASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV8-3A0A0A6YYJ7 ATP5G2P3-201ENST00000429083 425 ntBASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC139795.1-202ENST00000500444 432 ntBASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC004987.1-201ENST00000428627 508 ntBASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 BHLHE23-202ENST00000612929 1109 ntBASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC074183.2-201ENST00000623112 922 ntBASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 RPS2P7-201ENST00000447334 885 ntBASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SPCS2P3-201ENST00000500401 656 ntBASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 DUX4L18-201ENST00000553347 1267 ntBASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 AC087393.1-201ENST00000582896 145 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms