Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 AC005703.6-201ENST00000623265 1329 ntBASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.38■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.37■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 AC096631.2-201ENST00000436136 790 ntBASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 AC019069.1-201ENST00000610008 1333 ntBASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 AP003733.4-201ENST00000623785 1697 ntBASIC22.33■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AL139246.5-201ENST00000606645 996 ntBASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AC142381.3-201ENST00000568208 1670 ntBASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.29■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 AC110285.6-201ENST00000617652 491 ntBASIC22.29■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.29■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.27■■□□□ 1.16
TRBV23OR9-2A0A075B6M9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBV23OR9-2A0A075B6M9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms