Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 AL162426.1-201ENST00000624141 743 ntBASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPCPD1Q9NPB8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 KRT8P29-201ENST00000420409 1371 ntBASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPCPD1Q9NPB8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 FNTAP2-201ENST00000430308 634 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 KLF2P1-201ENST00000447438 1042 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 SERPINA13P-202ENST00000478994 924 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 BX088702.1-201ENST00000610784 235 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 AC018529.2-202ENST00000611482 3087 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 PKD1P5-201ENST00000532415 10291 ntBASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPCPD1Q9NPB8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AL133338.1-201ENST00000565695 1517 ntBASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms