Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPF2Q9HAU5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 TP73-211ENST00000604074 4806 ntTSL 5 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 RN7SL618P-201ENST00000477850 296 ntBASIC18.39■□□□□ 0.53
UPF2Q9HAU5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
UPF2Q9HAU5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 INE2-201ENST00000630399 1874 ntBASIC18.38■□□□□ 0.53
UPF2Q9HAU5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AC004835.2-201ENST00000603762 682 ntBASIC18.38■□□□□ 0.53
UPF2Q9HAU5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AC009093.7-201ENST00000623853 1223 ntBASIC18.38■□□□□ 0.53
UPF2Q9HAU5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 CICP17-201ENST00000418553 2377 ntBASIC18.38■□□□□ 0.53
UPF2Q9HAU5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF2Q9HAU5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF2Q9HAU5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms