Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 LILRP1-201ENST00000444199 1370 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AC126335.2-201ENST00000623362 4637 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AC007292.2-201ENST00000593524 1812 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 POM121L8P-201ENST00000417732 1281 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 POM121L9P-203ENST00000441984 1285 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FNDC9Q8TBE3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.48□□□□□ -0.25
FNDC9Q8TBE3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms