Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 TCAM1P-207ENST00000485295 1537 ntBASIC15□□□□□ -0.01
TRIM42Q8IWZ5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRIM42Q8IWZ5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 TOMM22P5-201ENST00000416399 439 ntBASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PMS2P2-201ENST00000425039 1128 ntBASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 TMEM198B-204ENST00000484016 896 ntBASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 AC007967.4-201ENST00000614700 386 ntBASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM42Q8IWZ5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 AL627223.1-201ENST00000416693 442 ntBASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 TSEN15P1-201ENST00000423257 515 ntBASIC14.98□□□□□ -0.01
TRIM42Q8IWZ5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms