Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AL161772.1-201ENST00000610494 4412 ntBASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC003102.2-201ENST00000589195 1469 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 INE2-201ENST00000630399 1874 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC006001.1-201ENST00000325130 474 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC007969.1-201ENST00000433675 447 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 KRT223P-202ENST00000449164 1292 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 FTLP10-202ENST00000505798 471 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 RHOXF1P1-202ENST00000635473 501 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 AC006453.4-201ENST00000636949 1252 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 COX11-210ENST00000639671 696 ntBASIC15.02■□□□□ -0
LYSMD3Q7Z3D4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 AC007686.3-201ENST00000619017 3487 ntBASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 AL354989.2-201ENST00000435838 1540 ntBASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 AC011840.2-201ENST00000563063 1520 ntBASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 MTHFR-210ENST00000641407 2387 ntBASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD3Q7Z3D4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 SALL4P5-201ENST00000419001 1760 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AL138725.1-201ENST00000407347 1314 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 FKBP4P6-201ENST00000457486 1332 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 RN7SKP230-201ENST00000365642 335 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms