Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NCLP19338 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NCLP19338 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC17.91■□□□□ 0.46
NCLP19338 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.91■□□□□ 0.46
NCLP19338 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.91■□□□□ 0.46
NCLP19338 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.91■□□□□ 0.46
NCLP19338 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.91■□□□□ 0.46
NCLP19338 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.91■□□□□ 0.46
NCLP19338 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.91■□□□□ 0.46
NCLP19338 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.91■□□□□ 0.46
NCLP19338 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.91■□□□□ 0.46
NCLP19338 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 MIR4745-201ENST00000577608 62 ntBASIC17.91■□□□□ 0.46
NCLP19338 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.91■□□□□ 0.46
NCLP19338 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.91■□□□□ 0.46
NCLP19338 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.91■□□□□ 0.46
NCLP19338 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCLP19338 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NCLP19338 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NCLP19338 FO393414.2-201ENST00000405153 598 ntBASIC17.9■□□□□ 0.46
NCLP19338 AC092580.3-201ENST00000430932 139 ntBASIC17.9■□□□□ 0.46
NCLP19338 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 IGHV3-42-201ENST00000520410 361 ntBASIC17.9■□□□□ 0.46
NCLP19338 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.9■□□□□ 0.46
NCLP19338 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 AC007967.4-201ENST00000614700 386 ntBASIC17.9■□□□□ 0.46
NCLP19338 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NCLP19338 AC004899.2-201ENST00000622993 3860 ntBASIC17.9■□□□□ 0.46
NCLP19338 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
NCLP19338 BEND3P1-201ENST00000421591 1944 ntBASIC17.9■□□□□ 0.46
NCLP19338 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCLP19338 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
NCLP19338 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NCLP19338 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.89■□□□□ 0.45
NCLP19338 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms