Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR3DP05423 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR3DP05423 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR3DP05423 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
POLR3DP05423 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR3DP05423 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR3DP05423 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR3DP05423 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR3DP05423 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.84■□□□□ 0.45
POLR3DP05423 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
POLR3DP05423 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR3DP05423 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 AC020910.5-201ENST00000623668 1865 ntBASIC17.84■□□□□ 0.45
POLR3DP05423 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR3DP05423 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR3DP05423 AC011840.2-201ENST00000563063 1520 ntBASIC17.83■□□□□ 0.45
POLR3DP05423 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR3DP05423 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR3DP05423 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR3DP05423 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR3DP05423 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
POLR3DP05423 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
POLR3DP05423 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
POLR3DP05423 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 RN7SKP175-201ENST00000408472 289 ntBASIC17.83■□□□□ 0.44
POLR3DP05423 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR3DP05423 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR3DP05423 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
POLR3DP05423 KRT8P13-201ENST00000463294 1010 ntBASIC17.83■□□□□ 0.44
POLR3DP05423 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR3DP05423 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 AC103810.3-201ENST00000583567 96 ntBASIC17.83■□□□□ 0.44
POLR3DP05423 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.83■□□□□ 0.44
POLR3DP05423 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
POLR3DP05423 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.83■□□□□ 0.44
POLR3DP05423 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
POLR3DP05423 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3DP05423 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3DP05423 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3DP05423 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms