Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.99□□□□□ -0.33
CCNKO75909 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCNKO75909 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.99□□□□□ -0.33
CCNKO75909 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.99□□□□□ -0.33
CCNKO75909 PCDHB17P-202ENST00000623466 3066 ntBASIC12.99□□□□□ -0.33
CCNKO75909 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCNKO75909 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCNKO75909 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCNKO75909 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.98□□□□□ -0.33
CCNKO75909 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
CCNKO75909 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 GPX1P2-201ENST00000429271 606 ntBASIC12.98□□□□□ -0.33
CCNKO75909 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.98□□□□□ -0.33
CCNKO75909 AL732292.2-201ENST00000609649 430 ntBASIC12.98□□□□□ -0.33
CCNKO75909 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 MAPK10-262ENST00000641051 5738 ntBASIC12.98□□□□□ -0.33
CCNKO75909 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCNKO75909 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.98□□□□□ -0.33
CCNKO75909 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCNKO75909 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.98□□□□□ -0.33
CCNKO75909 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
CCNKO75909 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.97□□□□□ -0.33
CCNKO75909 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.97□□□□□ -0.33
CCNKO75909 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.97□□□□□ -0.33
CCNKO75909 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.97□□□□□ -0.33
CCNKO75909 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.97□□□□□ -0.33
CCNKO75909 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.97□□□□□ -0.33
CCNKO75909 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCNKO75909 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCNKO75909 PCED1CP-201ENST00000419887 785 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms