Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DENRO43583 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DENRO43583 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
DENRO43583 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DENRO43583 AL391647.1-201ENST00000395664 511 ntBASIC13.8□□□□□ -0.2
DENRO43583 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 VN2R19P-201ENST00000442399 1052 ntBASIC13.8□□□□□ -0.2
DENRO43583 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.8□□□□□ -0.2
DENRO43583 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
DENRO43583 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.8□□□□□ -0.2
DENRO43583 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.8□□□□□ -0.2
DENRO43583 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.8□□□□□ -0.2
DENRO43583 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.8□□□□□ -0.2
DENRO43583 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 AC023141.13-201ENST00000604991 943 ntBASIC13.8□□□□□ -0.2
DENRO43583 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.8□□□□□ -0.2
DENRO43583 AC007064.4-201ENST00000637740 555 ntBASIC13.8□□□□□ -0.2
DENRO43583 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.8□□□□□ -0.2
DENRO43583 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DENRO43583 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
DENRO43583 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 AC009474.1-201ENST00000455096 1565 ntBASIC13.79□□□□□ -0.2
DENRO43583 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
DENRO43583 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DENRO43583 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
DENRO43583 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.79□□□□□ -0.2
DENRO43583 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.79□□□□□ -0.2
DENRO43583 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.79□□□□□ -0.2
DENRO43583 AC073648.2-201ENST00000510116 352 ntBASIC13.79□□□□□ -0.2
DENRO43583 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DENRO43583 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.79□□□□□ -0.2
DENRO43583 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DENRO43583 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 AC010970.1-201ENST00000445125 1848 ntBASIC13.78□□□□□ -0.2
DENRO43583 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms