Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLOCKO15516 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 AC023090.2-201ENST00000625182 2110 ntBASIC14.29□□□□□ -0.12
CLOCKO15516 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.29□□□□□ -0.12
CLOCKO15516 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 AL353705.2-201ENST00000428243 662 ntBASIC14.29□□□□□ -0.12
CLOCKO15516 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.29□□□□□ -0.12
CLOCKO15516 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.29□□□□□ -0.12
CLOCKO15516 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 AJ011932.1-201ENST00000621707 465 ntBASIC14.29□□□□□ -0.12
CLOCKO15516 AL645728.2-202ENST00000641679 227 ntBASIC14.29□□□□□ -0.12
CLOCKO15516 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.29□□□□□ -0.12
CLOCKO15516 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLOCKO15516 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLOCKO15516 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.28□□□□□ -0.12
CLOCKO15516 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.28□□□□□ -0.12
CLOCKO15516 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLOCKO15516 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.28□□□□□ -0.12
CLOCKO15516 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.28□□□□□ -0.12
CLOCKO15516 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLOCKO15516 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
CLOCKO15516 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
CLOCKO15516 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.27□□□□□ -0.12
CLOCKO15516 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
CLOCKO15516 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms