Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXN1O15353 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXN1O15353 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
FOXN1O15353 PTPN20CP-201ENST00000614090 920 ntBASIC17.76■□□□□ 0.43
FOXN1O15353 AC105137.3-201ENST00000617588 984 ntBASIC17.76■□□□□ 0.43
FOXN1O15353 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 CAP2P1-201ENST00000557743 1390 ntBASIC17.76■□□□□ 0.43
FOXN1O15353 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FOXN1O15353 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FOXN1O15353 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 POM121L8P-201ENST00000417732 1281 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FOXN1O15353 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN1O15353 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN1O15353 POM121L9P-203ENST00000441984 1285 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN1O15353 RPL18AP3-201ENST00000462885 528 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 RN7SL67P-201ENST00000492147 296 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
FOXN1O15353 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN1O15353 AP003398.1-201ENST00000531124 318 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXN1O15353 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN1O15353 AL136295.7-201ENST00000619226 1200 ntBASIC17.75■□□□□ 0.43
FOXN1O15353 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
FOXN1O15353 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN1O15353 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXN1O15353 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXN1O15353 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXN1O15353 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
FOXN1O15353 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXN1O15353 AC148477.4-201ENST00000613430 1793 ntBASIC17.74■□□□□ 0.43
FOXN1O15353 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN1O15353 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN1O15353 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN1O15353 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN1O15353 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN1O15353 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms