Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC4Q9Y696 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 PIN1P1-201ENST00000412108 996 ntBASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 KRT18P25-201ENST00000508931 1278 ntBASIC17.05■□□□□ 0.32
CLIC4Q9Y696 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 MIR4745-201ENST00000577608 62 ntBASIC17.05■□□□□ 0.32
CLIC4Q9Y696 AL033527.5-201ENST00000641382 801 ntBASIC17.05■□□□□ 0.32
CLIC4Q9Y696 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 AC020910.5-201ENST00000623668 1865 ntBASIC17.05■□□□□ 0.32
CLIC4Q9Y696 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC4Q9Y696 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 AL136172.1-201ENST00000598590 1394 ntBASIC17.04■□□□□ 0.32
CLIC4Q9Y696 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TLE1P1-201ENST00000422965 589 ntBASIC17.04■□□□□ 0.32
CLIC4Q9Y696 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 AC131206.1-201ENST00000538078 1211 ntBASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TP53TG3HP-202ENST00000569755 579 ntBASIC17.04■□□□□ 0.32
CLIC4Q9Y696 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 AC092364.2-202ENST00000597012 1073 ntBASIC17.04■□□□□ 0.32
CLIC4Q9Y696 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIC4Q9Y696 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms