Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ERCC4Q92889 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC4Q92889 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ERCC4Q92889 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC4Q92889 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.05■□□□□ 0.32
ERCC4Q92889 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.05■□□□□ 0.32
ERCC4Q92889 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ERCC4Q92889 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC4Q92889 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC4Q92889 DRD5P1-201ENST00000456605 1438 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC4Q92889 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.04■□□□□ 0.32
ERCC4Q92889 FAM86GP-201ENST00000448322 971 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 MEIS3P1-201ENST00000495167 958 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 AC004066.1-201ENST00000502488 802 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.04■□□□□ 0.32
ERCC4Q92889 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.04■□□□□ 0.32
ERCC4Q92889 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.04■□□□□ 0.32
ERCC4Q92889 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ERCC4Q92889 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC4Q92889 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 AL122018.1-201ENST00000446607 2310 ntBASIC17.04■□□□□ 0.32
ERCC4Q92889 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC4Q92889 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ERCC4Q92889 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ERCC4Q92889 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC4Q92889 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC4Q92889 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ERCC4Q92889 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ERCC4Q92889 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC4Q92889 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC4Q92889 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC4Q92889 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC4Q92889 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC4Q92889 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC4Q92889 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC4Q92889 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC4Q92889 SRD5A3P1-201ENST00000603021 949 ntBASIC17.03■□□□□ 0.32
ERCC4Q92889 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC4Q92889 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC4Q92889 KRT8P14-201ENST00000414254 1442 ntBASIC17.03■□□□□ 0.32
ERCC4Q92889 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms