Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
PIK3C3Q8NEB9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AL121723.1-201ENST00000445194 1519 ntBASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AL158211.3-201ENST00000607385 239 ntBASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 PPT1-213ENST00000641319 2388 ntBASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 CR383656.2-201ENST00000548656 2254 ntBASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PIK3C3Q8NEB9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 SPDYE12P-201ENST00000618416 771 ntBASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PIK3C3Q8NEB9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms