Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 HMGN1P19-201ENST00000436976 333 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 KRT18P43-201ENST00000469825 1281 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 RARRES2P5-201ENST00000564013 466 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 RRP7BP-205ENST00000566851 833 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AC000095.1-201ENST00000603208 874 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AL391069.4-201ENST00000609583 481 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CICP17-201ENST00000418553 2377 ntBASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 AC093004.1-201ENST00000508850 424 ntBASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 SPDYE18-201ENST00000510091 1050 ntBASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 AC104794.3-201ENST00000566840 1248 ntBASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATPAF1Q5TC12 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 AP000845.1-201ENST00000581677 2131 ntBASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ATPAF1Q5TC12 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms