Protein–RNA interactions for Protein: P68400

CSNK2A1, Casein kinase II subunit alpha, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1P68400 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 AL162274.1-201ENST00000617191 1098 ntBASIC13.55□□□□□ -0.24
CSNK2A1P68400 ENPP7P14-201ENST00000621765 1040 ntBASIC13.55□□□□□ -0.24
CSNK2A1P68400 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK2A1P68400 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK2A1P68400 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AL138709.1-201ENST00000614840 1693 ntBASIC13.54□□□□□ -0.24
CSNK2A1P68400 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.54□□□□□ -0.24
CSNK2A1P68400 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AC026434.2-201ENST00000506094 1078 ntBASIC13.54□□□□□ -0.24
CSNK2A1P68400 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK2A1P68400 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK2A1P68400 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK2A1P68400 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK2A1P68400 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms