Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 AC023090.2-201ENST00000625182 2110 ntBASIC16.85■□□□□ 0.29
TPM4P67936 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TPM4P67936 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TPM4P67936 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 AL080243.2-201ENST00000418783 582 ntBASIC16.85■□□□□ 0.29
TPM4P67936 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TPM4P67936 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM4P67936 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM4P67936 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 LINC01115-203ENST00000606068 577 ntBASIC16.85■□□□□ 0.29
TPM4P67936 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.85■□□□□ 0.29
TPM4P67936 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TPM4P67936 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM4P67936 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM4P67936 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 AGGF1P1-201ENST00000509500 2073 ntBASIC16.84■□□□□ 0.29
TPM4P67936 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.84■□□□□ 0.29
TPM4P67936 ALG1L5P-201ENST00000482043 771 ntBASIC16.84■□□□□ 0.29
TPM4P67936 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.84■□□□□ 0.29
TPM4P67936 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.84■□□□□ 0.29
TPM4P67936 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.84■□□□□ 0.29
TPM4P67936 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.84■□□□□ 0.29
TPM4P67936 AL513210.1-201ENST00000629608 234 ntBASIC16.84■□□□□ 0.29
TPM4P67936 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TPM4P67936 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms