Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SNCAP37840 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SNCAP37840 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SNCAP37840 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 MTND6P24-201ENST00000440466 518 ntBASIC12.4□□□□□ -0.42
SNCAP37840 DNAJB3-201ENST00000446806 729 ntBASIC12.4□□□□□ -0.42
SNCAP37840 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.4□□□□□ -0.42
SNCAP37840 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.4□□□□□ -0.42
SNCAP37840 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.4□□□□□ -0.42
SNCAP37840 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.4□□□□□ -0.42
SNCAP37840 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCAP37840 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SNCAP37840 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCAP37840 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.4□□□□□ -0.43
SNCAP37840 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCAP37840 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.4□□□□□ -0.43
SNCAP37840 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCAP37840 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.4□□□□□ -0.43
SNCAP37840 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.4□□□□□ -0.43
SNCAP37840 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCAP37840 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCAP37840 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.39□□□□□ -0.43
SNCAP37840 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 AC015818.8-201ENST00000587907 1519 ntBASIC12.39□□□□□ -0.43
SNCAP37840 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCAP37840 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.39□□□□□ -0.43
SNCAP37840 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCAP37840 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms