Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA3P32297 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA3P32297 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA3P32297 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.83■□□□□ 0.13
CHRNA3P32297 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CHRNA3P32297 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CHRNA3P32297 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.83■□□□□ 0.13
CHRNA3P32297 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
CHRNA3P32297 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA3P32297 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 BRI3BPP1-201ENST00000594224 787 ntBASIC15.83■□□□□ 0.12
CHRNA3P32297 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 AC133539.2-201ENST00000604757 467 ntBASIC15.83■□□□□ 0.12
CHRNA3P32297 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 AL360270.3-201ENST00000609118 1348 ntBASIC15.83■□□□□ 0.12
CHRNA3P32297 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA3P32297 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA3P32297 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHRNA3P32297 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHRNA3P32297 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHRNA3P32297 GK-202ENST00000378941 458 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA3P32297 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 RPL13AP25-201ENST00000484130 612 ntBASIC15.82■□□□□ 0.12
CHRNA3P32297 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.82■□□□□ 0.12
CHRNA3P32297 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AC000095.1-201ENST00000603208 874 ntBASIC15.82■□□□□ 0.12
CHRNA3P32297 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms