Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 KRT8P24-201ENST00000560290 1559 ntBASIC13.2□□□□□ -0.3
ATF1P18846 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 AC018665.1-201ENST00000622927 1362 ntBASIC13.2□□□□□ -0.3
ATF1P18846 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATF1P18846 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ATF1P18846 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.19□□□□□ -0.3
ATF1P18846 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.19□□□□□ -0.3
ATF1P18846 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ATF1P18846 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.19□□□□□ -0.3
ATF1P18846 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.19□□□□□ -0.3
ATF1P18846 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 AC140878.1-201ENST00000565277 250 ntBASIC13.19□□□□□ -0.3
ATF1P18846 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.19□□□□□ -0.3
ATF1P18846 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.19□□□□□ -0.3
ATF1P18846 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.19□□□□□ -0.3
ATF1P18846 AC004461.2-201ENST00000629517 803 ntBASIC13.19□□□□□ -0.3
ATF1P18846 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 KRT8P22-201ENST00000562317 1415 ntBASIC13.19□□□□□ -0.3
ATF1P18846 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATF1P18846 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATF1P18846 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
ATF1P18846 INE2-201ENST00000630399 1874 ntBASIC13.19□□□□□ -0.3
ATF1P18846 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.18□□□□□ -0.3
ATF1P18846 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATF1P18846 AC090505.1-201ENST00000430515 1834 ntBASIC13.18□□□□□ -0.3
ATF1P18846 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATF1P18846 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms