Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL355802.2-201ENST00000402069 882 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC004911.1-201ENST00000416316 871 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC007967.3-201ENST00000434308 558 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS15-203ENST00000586096 570 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL157888.1-201ENST00000631930 593 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL049757.1-201ENST00000616842 1596 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AP002761.4-201ENST00000565433 3361 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AL353732.1-201ENST00000569618 1459 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 PTCH1-203ENST00000375274 4720 ntTSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AC026797.1-201ENST00000624837 2869 ntBASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms