Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 AC136759.1-202ENST00000530858 2194 ntBASIC13.31□□□□□ -0.28
DUX4Q9UBX2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUX4Q9UBX2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 TSSK5P-201ENST00000423978 907 ntBASIC13.3□□□□□ -0.28
DUX4Q9UBX2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 EEF1DP4-201ENST00000446006 880 ntBASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AL844908.2-201ENST00000609461 460 ntBASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DUX4Q9UBX2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 AC011477.6-201ENST00000604980 1927 ntBASIC13.29□□□□□ -0.28
DUX4Q9UBX2 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 CICP8-201ENST00000455800 2813 ntBASIC13.29□□□□□ -0.28
DUX4Q9UBX2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUX4Q9UBX2 MIR770-201ENST00000390219 98 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms