Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 AC092299.1-201ENST00000632679 757 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 AL805961.1-201ENST00000642026 753 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 AL162727.3-201ENST00000635661 2787 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AC007950.2-201ENST00000615045 2347 ntBASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AC104784.1-201ENST00000473096 294 ntBASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 RBM8B-201ENST00000555532 525 ntBASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 AC133540.1-201ENST00000620845 1019 ntBASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 FRMPD2B-201ENST00000431305 1347 ntBASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HCFC1R1Q9NWW0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 CICP23-201ENST00000605013 2741 ntBASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AC018629.1-201ENST00000623381 1736 ntBASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AC008723.1-201ENST00000506922 207 ntBASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms