Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AL162726.2-201ENST00000438986 1017 ntBASIC14.01□□□□□ -0.17
TM9SF2Q99805 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 KRT18P43-201ENST00000469825 1281 ntBASIC14.01□□□□□ -0.17
TM9SF2Q99805 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AC015936.2-201ENST00000593177 259 ntBASIC14.01□□□□□ -0.17
TM9SF2Q99805 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AC097359.3-201ENST00000603982 1210 ntBASIC14.01□□□□□ -0.17
TM9SF2Q99805 AL162274.1-201ENST00000617191 1098 ntBASIC14.01□□□□□ -0.17
TM9SF2Q99805 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF2Q99805 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF2Q99805 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 AC006504.5-208ENST00000588784 2401 ntBASIC14□□□□□ -0.17
TM9SF2Q99805 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
TM9SF2Q99805 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14□□□□□ -0.17
TM9SF2Q99805 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14□□□□□ -0.17
TM9SF2Q99805 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14□□□□□ -0.17
TM9SF2Q99805 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14□□□□□ -0.17
TM9SF2Q99805 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms