Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 MIR1233-2-201ENST00000408138 82 ntBASIC15.19■□□□□ 0.02
CDKL2Q92772 MIR1233-1-201ENST00000408722 82 ntBASIC15.19■□□□□ 0.02
CDKL2Q92772 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC009477.1-201ENST00000452936 217 ntBASIC15.19■□□□□ 0.02
CDKL2Q92772 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.19■□□□□ 0.02
CDKL2Q92772 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.19■□□□□ 0.02
CDKL2Q92772 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 SRD5A3P1-201ENST00000603021 949 ntBASIC15.19■□□□□ 0.02
CDKL2Q92772 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CDKL2Q92772 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CDKL2Q92772 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKL2Q92772 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 AL354702.1-201ENST00000442006 1960 ntBASIC15.18■□□□□ 0.02
CDKL2Q92772 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.18■□□□□ 0.02
CDKL2Q92772 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKL2Q92772 AC026410.3-201ENST00000514280 936 ntBASIC15.18■□□□□ 0.02
CDKL2Q92772 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.18■□□□□ 0.02
CDKL2Q92772 AC135586.1-201ENST00000539323 574 ntBASIC15.18■□□□□ 0.02
CDKL2Q92772 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 RARRES2P5-201ENST00000564013 466 ntBASIC15.18■□□□□ 0.02
CDKL2Q92772 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKL2Q92772 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKL2Q92772 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKL2Q92772 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKL2Q92772 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 AC092135.3-201ENST00000624151 1846 ntBASIC15.17■□□□□ 0.02
CDKL2Q92772 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CDKL2Q92772 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKL2Q92772 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKL2Q92772 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CDKL2Q92772 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKL2Q92772 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKL2Q92772 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKL2Q92772 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDKL2Q92772 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKL2Q92772 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDKL2Q92772 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKL2Q92772 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms