Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 AC018712.1-201ENST00000455767 687 ntBASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 LINC01711-201ENST00000598340 967 ntBASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 KRT8P35-201ENST00000483942 1338 ntBASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 MYADML-201ENST00000474610 2147 ntBASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.78□□□□□ -0.52
MBD3L1Q8WWY6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 KHSRPP1-201ENST00000427983 1768 ntBASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.77□□□□□ -0.52
MBD3L1Q8WWY6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 MIR346-201ENST00000362234 95 ntBASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 MIR3652-201ENST00000579335 131 ntBASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.77□□□□□ -0.53
MBD3L1Q8WWY6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms