Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SPDYE9P-201ENST00000570642 692 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 SLC25A6P4-201ENST00000586535 553 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 SPDYE10P-202ENST00000612005 668 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 SPDYE8P-202ENST00000612377 668 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AC092865.6-201ENST00000642101 219 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AC138969.3-201ENST00000546612 1459 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AC138932.2-201ENST00000548268 1459 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AC126755.4-201ENST00000549796 1459 ntBASIC13.03□□□□□ -0.32
BEST4Q8NFU0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BEST4Q8NFU0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 AC055811.4-201ENST00000624039 1754 ntBASIC13.02□□□□□ -0.32
BEST4Q8NFU0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BEST4Q8NFU0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 RNA5SP416-201ENST00000516838 111 ntBASIC13.02□□□□□ -0.33
BEST4Q8NFU0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 HLA-A-201ENST00000376802 1334 ntBASIC13.02□□□□□ -0.33
BEST4Q8NFU0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 AC012508.2-201ENST00000567613 1472 ntBASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 MEX3B-202ENST00000558133 4333 ntBASIC13.02□□□□□ -0.33
BEST4Q8NFU0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
BEST4Q8NFU0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms