Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 UPK3BP1-201ENST00000428678 509 ntBASIC12.52□□□□□ -0.41
ZNF546Q86UE3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 AC108751.1-201ENST00000490852 363 ntBASIC12.52□□□□□ -0.41
ZNF546Q86UE3 KRT18P35-201ENST00000510488 1269 ntBASIC12.52□□□□□ -0.41
ZNF546Q86UE3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
ZNF546Q86UE3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AC012617.1-204ENST00000586340 2305 ntBASIC12.51□□□□□ -0.41
ZNF546Q86UE3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms