Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC044860.1-202ENST00000559481 777 ntBASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 SAMD11P1-201ENST00000571429 661 ntBASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TUBB3P1-201ENST00000405796 1332 ntBASIC13.36□□□□□ -0.27
ODF4Q2M2E3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 TOMM22P5-201ENST00000416399 439 ntBASIC13.35□□□□□ -0.27
ODF4Q2M2E3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SDHAP3-202ENST00000515467 728 ntBASIC13.35□□□□□ -0.27
ODF4Q2M2E3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 AC073592.8-201ENST00000624126 511 ntBASIC13.35□□□□□ -0.27
ODF4Q2M2E3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ODF4Q2M2E3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 CNN2P2-201ENST00000443536 909 ntBASIC13.34□□□□□ -0.27
ODF4Q2M2E3 CNN2P3-201ENST00000450201 906 ntBASIC13.34□□□□□ -0.27
ODF4Q2M2E3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.34□□□□□ -0.27
ODF4Q2M2E3 AC069120.2-201ENST00000524091 540 ntBASIC13.34□□□□□ -0.27
ODF4Q2M2E3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms