Protein–RNA interactions for Protein: P55199

ELL, RNA polymerase II elongation factor ELL, humanhuman

Predicted RBP Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELLP55199 AC006538.3-201ENST00000612495 578 ntBASIC12.31□□□□□ -0.44
ELLP55199 LINC00628-201ENST00000628516 1289 ntBASIC12.31□□□□□ -0.44
ELLP55199 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.31□□□□□ -0.44
ELLP55199 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.31□□□□□ -0.44
ELLP55199 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.31□□□□□ -0.44
ELLP55199 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.31□□□□□ -0.44
ELLP55199 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ELLP55199 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 AC152010.1-201ENST00000415779 2006 ntBASIC12.3□□□□□ -0.44
ELLP55199 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 REXO1L1P-201ENST00000379010 6598 ntBASIC12.3□□□□□ -0.44
ELLP55199 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ELLP55199 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 CNN2P2-201ENST00000443536 909 ntBASIC12.3□□□□□ -0.44
ELLP55199 CNN2P3-201ENST00000450201 906 ntBASIC12.3□□□□□ -0.44
ELLP55199 PHKG1P2-201ENST00000457537 863 ntBASIC12.3□□□□□ -0.44
ELLP55199 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 AC067863.1-201ENST00000494933 530 ntBASIC12.3□□□□□ -0.44
ELLP55199 AC069262.1-201ENST00000539058 672 ntBASIC12.3□□□□□ -0.44
ELLP55199 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 AC015911.4-201ENST00000588022 1070 ntBASIC12.3□□□□□ -0.44
ELLP55199 AC027612.4-201ENST00000605371 583 ntBASIC12.3□□□□□ -0.44
ELLP55199 GPALPP1-207ENST00000611650 899 ntBASIC12.3□□□□□ -0.44
ELLP55199 AL136317.3-201ENST00000618497 906 ntBASIC12.3□□□□□ -0.44
ELLP55199 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.3□□□□□ -0.44
ELLP55199 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.3□□□□□ -0.44
ELLP55199 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ELLP55199 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ELLP55199 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ELLP55199 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ELLP55199 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.29□□□□□ -0.44
ELLP55199 KRT8P37-201ENST00000451609 1420 ntBASIC12.29□□□□□ -0.44
ELLP55199 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ELLP55199 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms