Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.83□□□□□ -0.2
THBS1P07996 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 ELK1P1-201ENST00000485699 580 ntBASIC13.83□□□□□ -0.2
THBS1P07996 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
THBS1P07996 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC13.83□□□□□ -0.2
THBS1P07996 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.83□□□□□ -0.2
THBS1P07996 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.83□□□□□ -0.2
THBS1P07996 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
THBS1P07996 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.83□□□□□ -0.2
THBS1P07996 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.83□□□□□ -0.2
THBS1P07996 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.82□□□□□ -0.2
THBS1P07996 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
THBS1P07996 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
THBS1P07996 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
THBS1P07996 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
THBS1P07996 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.82□□□□□ -0.2
THBS1P07996 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.82□□□□□ -0.2
THBS1P07996 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 AC091917.2-201ENST00000505002 744 ntBASIC13.82□□□□□ -0.2
THBS1P07996 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.82□□□□□ -0.2
THBS1P07996 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.82□□□□□ -0.2
THBS1P07996 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 AC097376.2-205ENST00000610159 5334 ntBASIC13.82□□□□□ -0.2
THBS1P07996 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
THBS1P07996 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.82□□□□□ -0.2
THBS1P07996 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
THBS1P07996 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
THBS1P07996 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
THBS1P07996 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 AC003102.2-201ENST00000589195 1469 ntBASIC13.81□□□□□ -0.2
THBS1P07996 SALL4P5-201ENST00000419001 1760 ntBASIC13.81□□□□□ -0.2
THBS1P07996 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
THBS1P07996 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.81□□□□□ -0.2
THBS1P07996 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.81□□□□□ -0.2
THBS1P07996 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.81□□□□□ -0.2
THBS1P07996 AC022137.2-201ENST00000503482 481 ntBASIC13.81□□□□□ -0.2
THBS1P07996 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.81□□□□□ -0.2
THBS1P07996 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
THBS1P07996 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.81□□□□□ -0.2
THBS1P07996 AC009486.1-201ENST00000569860 813 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms