Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAPDHP04406 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GAPDHP04406 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
GAPDHP04406 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAPDHP04406 AL356585.2-201ENST00000625078 2396 ntBASIC12.62□□□□□ -0.39
GAPDHP04406 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.62□□□□□ -0.39
GAPDHP04406 DOC2GP-202ENST00000514950 1163 ntBASIC12.62□□□□□ -0.39
GAPDHP04406 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 AJ011932.1-201ENST00000621707 465 ntBASIC12.62□□□□□ -0.39
GAPDHP04406 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 AC099521.3-201ENST00000624251 2938 ntBASIC12.62□□□□□ -0.39
GAPDHP04406 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GAPDHP04406 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
GAPDHP04406 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.62□□□□□ -0.39
GAPDHP04406 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAPDHP04406 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.62□□□□□ -0.39
GAPDHP04406 PPT1-213ENST00000641319 2388 ntBASIC12.62□□□□□ -0.39
GAPDHP04406 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.62□□□□□ -0.39
GAPDHP04406 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.61□□□□□ -0.39
GAPDHP04406 MRPS18AP1-201ENST00000414458 589 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.61□□□□□ -0.39
GAPDHP04406 TPRX2P-201ENST00000535362 881 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
GAPDHP04406 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.61□□□□□ -0.39
GAPDHP04406 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 AL122018.1-201ENST00000446607 2310 ntBASIC12.61□□□□□ -0.39
GAPDHP04406 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.61□□□□□ -0.39
GAPDHP04406 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAPDHP04406 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GAPDHP04406 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAPDHP04406 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms