Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 AC004945.1-201ENST00000416738 983 ntBASIC14.23□□□□□ -0.13
AP4S1Q9Y587 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PDPK2P-202ENST00000562415 1191 ntBASIC14.23□□□□□ -0.13
AP4S1Q9Y587 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 Z82170.1-201ENST00000625081 3192 ntBASIC14.23□□□□□ -0.13
AP4S1Q9Y587 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AL360270.3-201ENST00000609118 1348 ntBASIC14.22□□□□□ -0.13
AP4S1Q9Y587 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AL355306.1-201ENST00000415580 579 ntBASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AC074044.1-201ENST00000609673 707 ntBASIC14.22□□□□□ -0.13
AP4S1Q9Y587 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 AC019294.4-201ENST00000561777 2905 ntBASIC14.22□□□□□ -0.13
AP4S1Q9Y587 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
AP4S1Q9Y587 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP4S1Q9Y587 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms