Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 AP003419.4-201ENST00000616071 517 ntBASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.42■□□□□ 0.06
HCFC1R1Q9NWW0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 AC132872.4-202ENST00000622924 2756 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 WASH3P-207ENST00000560956 1394 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 AL627231.1-201ENST00000394467 1125 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 AC026316.1-201ENST00000398900 414 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 RPL8P2-201ENST00000430538 502 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 NOC2LP1-201ENST00000450578 752 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 AC026803.1-201ENST00000569130 274 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 LINC00554-201ENST00000564841 3011 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 AC015909.3-201ENST00000572855 1794 ntBASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
HCFC1R1Q9NWW0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 TMBIM7P-202ENST00000641474 1516 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 AL035414.1-201ENST00000451327 857 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 RN7SL181P-201ENST00000462921 277 ntBASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HCFC1R1Q9NWW0 RN7SL67P-201ENST00000492147 296 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms