Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SDHAF3Q9NRP4 MSTO2P-201ENST00000314835 1709 ntBASIC13.84□□□□□ -0.19
SDHAF3Q9NRP4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.84□□□□□ -0.19
SDHAF3Q9NRP4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SDHAF3Q9NRP4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SDHAF3Q9NRP4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 AC092053.3-201ENST00000641308 4975 ntBASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SDHAF3Q9NRP4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC092933.1-201ENST00000393644 945 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 TMEM14DP-201ENST00000422205 345 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 EIF3FP3-201ENST00000434851 1086 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC007551.1-201ENST00000457394 519 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC106760.1-201ENST00000508690 800 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 KRT17P8-201ENST00000540749 863 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 RAB43P1-201ENST00000561790 589 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC025279.2-201ENST00000569730 653 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 AC239800.4-201ENST00000603712 296 ntBASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SDHAF3Q9NRP4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AL359258.3-201ENST00000622910 2331 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AL023775.1-201ENST00000454907 1746 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC091951.1-201ENST00000512854 2465 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms